Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921895.1_cds_XP_016470786.1_63197
CDS Infomation

[gene=LOC107793029] [db_xref=GeneID:107793029] [protein=oxalate--CoA ligase-like] [protein_id=XP_016470786.1] [location=complement(join(8909..8916,9093..9339,9521..9624,10566..11156,11733..12189,12357..12560))] [gbkey=CDS]
Sequence

ATGGAAAGTAATTTGACACTCACGGGGTTTCTGAAACATACTGCTGCAAAATTCCCTACC
CGTCGGGCTATATCTGTTTCGGGGAAATTCGATGTAACACATGCAAGGCTTCATGAACTT
ATCGAACATGCCGCTTCTCAACTTGTTGCTGCTGGTGTTAAGCCCCGTGATGTCGTCGCT
CTTACCTTTCCCAATACCATTGAGTTGGTGATTATGTTTTTGGCTGTAATTCGAGTTGGA
GCCACGGCAGCGCCACTAAATTCAGCATACACGTCCGAAGAATTCGAGTTCTATTTATCA
GATTCCGAGTCCAAACTGTTGTTAATTGCAAAGGAAGGTAATGAGGCAGCTCAAGCAGCA
GCAACGAAGCTCAATGTCCCTCAAATTGCTGTGACTCTGCCCCATTCCGACTCTAATGTC
TCTCTCATCCAGAGTAATCCGCTCTCAGATTCTGAATCGGTTTCTAAGATTGTTAATGAA
CCGTCCGATGTTGCACTTTTCCTCCATACCTCTGGCACCACGAGCAGACCAAAGGGTGTT
CCCCTGACACAACACAATTTAGTATCATCAGTGAACAACATCAAATCGGTTTACAAACTC
ACTGAATCCGACTCTACAGTCATCGTTTTGCCACTCTTTCATGTCCATGGATTAATTGCA
GGGTTACTGAGCTCACTTGGTGCTGGAGGATCTGTGACACTCCCTGCATCTGGGAGATTC
TCTGCTTCATCTTTCTGGTCAGATATGAAAAATTACAACGCCACATGGTACACAGCTGTG
CCTACTATTCACCAAATCCTATTGGATCGCCACTTGAGCAGTCCCGAATCTGCTTACCCG
AAACTCCGATTCATTAGGAGTTGCAGTGCTGCTCTAGCACCATCTATACTATCTAGGCTA
GAAGAAGCATTCGGTGCACCTGTTTTAGAGGCATATGCAATGACAGAGGCCACACATTTA
ATGTGTTCAAATCCATTACCTGAAAATGGTCCACACTTGCCAGGGTCAGTAGGAAAACCT
GTGGGTCAAGAAATGGCAATATTGGATGAGAATGGTGTGGTACAAGGGCCTGATTCAAAG
GGAGAGATTTGCATTAGGGGTCCAAATGTTACTAAAGGGTACAAGAATAATCCTGAGGCT
AATAAATCTGCTTTCCAGTTTGGTTGGTTTCATACTGGAGATGTTGGATACTTGGACTCT
GATGGATATTTGCATTTGGTTGGAAGGATCAAGGAATTGATCAACCGTGGAGGGGAAAAA
ATATCACCTATAGAAGTGGATGCGGTCCTTGTTTCTCATCCTGATATTTCTCAGGCTGTT
GCTTTCGGGGTTCCTGATGACAAATATGGTGAAGAGATAAACTGCGCAGTTATTCCACGA
GAAGGGTCAAAGATAGATGAAGCAGACGTCGCGGGATTCTGCAAGAAAAATCTGGCAGCC
TTTAAGGTCCCAAAAAAGGTGTTTATGACCGATTCTCTTCCAAAAACTGCAACTGGTAAA
ATTCAACGAAGACTTGTCGCGGACAGATCTCAACTGCAAAAGTGCCCAAGTTTGGAGCTT
AAAAATATACTTGGGTCTCTACAATTGCTTAAGCAGATTAACGGTTACTAA

Peptide Sequence

PEP ID

XP_016470786.1
PEP Infomation

PREDICTED: oxalate--CoA ligase-like [Nicotiana tabacum]
Sequence

MESNLTLTGFLKHTAAKFPTRRAISVSGKFDVTHARLHELIEHAASQLVAAGVKPRDVVA
LTFPNTIELVIMFLAVIRVGATAAPLNSAYTSEEFEFYLSDSESKLLLIAKEGNEAAQAA
ATKLNVPQIAVTLPHSDSNVSLIQSNPLSDSESVSKIVNEPSDVALFLHTSGTTSRPKGV
PLTQHNLVSSVNNIKSVYKLTESDSTVIVLPLFHVHGLIAGLLSSLGAGGSVTLPASGRF
SASSFWSDMKNYNATWYTAVPTIHQILLDRHLSSPESAYPKLRFIRSCSAALAPSILSRL
EEAFGAPVLEAYAMTEATHLMCSNPLPENGPHLPGSVGKPVGQEMAILDENGVVQGPDSK
GEICIRGPNVTKGYKNNPEANKSAFQFGWFHTGDVGYLDSDGYLHLVGRIKELINRGGEK
ISPIEVDAVLVSHPDISQAVAFGVPDDKYGEEINCAVIPREGSKIDEADVAGFCKKNLAA
FKVPKKVFMTDSLPKTATGKIQRRLVADRSQLQKCPSLELKNILGSLQLLKQINGY

Transcript Sequence

Gene sequence data has not been registered.